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ITエンジニアというより、IT系雑務者

gemにfftwが含まれていたときのエラー解消【numoのインストール時など】

発生条件

gemのnumoをinstallするときに発生。 numo以外の場合でも発生する可能性があります。

macOSのバージョン

$ sw_vers
ProductName:    Mac OS X
ProductVersion: 10.15.5
BuildVersion:   19F101

rubyのバージョン

$ ruby -v
ruby 2.6.3p62 (2019-04-16 revision 67580) [x86_64-darwin18]

Gem

# Gemfile
gem 'numo'

発生したコマンド

対象ディレクトリ内で、下記コマンドを実行した。

$ bundle install

解決方法

brewなどでfftwをインストールする。

brew install fftw

原因

  27   │ conftest.c:3:10: fatal error: 'fftw3.h' file not found
  28#include <fftw3.h>

'fftw3.h' file not foundですね。

エラー内容

Installing numo-fftw 0.1.1 with native extensions
Gem::Ext::BuildError: ERROR: Failed to build gem native extension.

    current directory: /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/gems/numo-fftw-0.1.1/ext/numo/fftw
/Users/user/.rbenv/versions/2.6.3/bin/ruby -I /Users/user/.rbenv/versions/2.6.3/lib/ruby/2.6.0 -r ./siteconf20200817-9730-1r45s8z.rb extconf.rb
checking for numo/narray.h... yes
checking for fftw3.h... no
*** extconf.rb failed ***
Could not create Makefile due to some reason, probably lack of necessary
libraries and/or headers.  Check the mkmf.log file for more details.  You may
need configuration options.

Provided configuration options:
    --with-opt-dir
    --without-opt-dir
    --with-opt-include
    --without-opt-include=${opt-dir}/include
    --with-opt-lib
    --without-opt-lib=${opt-dir}/lib
    --with-make-prog
    --without-make-prog
    --srcdir=.
    --curdir
    --ruby=/Users/user/.rbenv/versions/2.6.3/bin/$(RUBY_BASE_NAME)
    --with-fftw-dir
    --without-fftw-dir
    --with-fftw-include
    --without-fftw-include=${fftw-dir}/include
    --with-fftw-lib
    --without-fftw-lib=${fftw-dir}/lib

 Header fftw3.h was not found. Give pathname as follows:
  % ruby extconf.rb --with-fftw-include=header_dir

To see why this extension failed to compile, please check the mkmf.log which can be found here:

  /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/extensions/x86_64-darwin-18/2.6.0-static/numo-fftw-0.1.1/mkmf.log

extconf failed, exit code 1

Gem files will remain installed in /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/gems/numo-fftw-0.1.1 for inspection.
Results logged to /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/extensions/x86_64-darwin-18/2.6.0-static/numo-fftw-0.1.1/gem_make.out

An error occurred while installing numo-fftw (0.1.1), and Bundler cannot continue.
Make sure that `gem install numo-fftw -v '0.1.1' --source 'https://rubygems.org/'` succeeds before bundling.

logを確認

cat /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/extensions/x86_64-darwin-18/2.6.0-static/numo-fftw-0.1.1/gem_make.out

  31   │ To see why this extension failed to compile, please check the mkmf.log which ca
       │ n be found here:
  32   │
  33   │   /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/extensions/x86_64-darwi
       │ n-18/2.6.0-static/numo-fftw-0.1.1/mkmf.log

さらに確認

cat /Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/extensions/x86_64-darwin-18/2.6.0-static/numo-fftw-0.1.1/mkmf.log


  24   │ have_header: checking for fftw3.h... -------------------- no
  25   │
  26   │ "clang -E -I/Users/user/.rbenv/versions/2.6.3/lib/ruby/gems/2.6.0/gems/numo-nar
       │ ray-0.9.1.8/lib/numo -I/Users/user/.rbenv/versions/2.6.3/include/ruby-2.6.0/x86
       │ _64-darwin18 -I/Users/user/.rbenv/versions/2.6.3/include/ruby-2.6.0/ruby/backwa
       │ rd -I/Users/user/.rbenv/versions/2.6.3/include/ruby-2.6.0 -I. -I/Users/user/.rb
       │ env/versions/2.6.3/include  -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -D_DARWIN_UNLIMI
       │ TED_SELECT -D_REENTRANT   -O3 -ggdb3 -Wall -Wextra -Wdeclaration-after-statemen
       │ t -Wdeprecated-declarations -Wdivision-by-zero -Wimplicit-function-declaration
       │ -Wimplicit-int -Wpointer-arith -Wshorten-64-to-32 -Wwrite-strings -Wmissing-nor
       │ eturn -Wno-constant-logical-operand -Wno-long-long -Wno-missing-field-initializ
       │ ers -Wno-overlength-strings -Wno-parentheses-equality -Wno-self-assign -Wno-tau
       │ tological-compare -Wno-unused-parameter -Wno-unused-value -Wunused-variable -We
       │ xtra-tokens  -pipe  conftest.c -o conftest.i"
  27   │ conftest.c:3:10: fatal error: 'fftw3.h' file not found
  28   │ #include <fftw3.h>
  29   │          ^~~~~~~~~
  30   │ 1 error generated.
  31   │ checked program was:
  32   │ /* begin */
  33   │ 1: #include "ruby.h"
  34   │ 2:
  35   │ 3: #include <fftw3.h>
  36   │ /* end */
  37   │

27行目の部分です。

  27   │ conftest.c:3:10: fatal error: 'fftw3.h' file not found
  28#include <fftw3.h>

'fftw3.h' file not foundなので、fftwをinstallする。

brew install fftw

CPUファンが高速回転し始めた。

保冷剤でPCを冷却しつつ、待つこと20分...

再びコマンド実行

$ bundle install

一応成功しました。が、再びエラーが出ました。

今度は、gslがないようですね。

An error occurred while installing numo-gsl (0.1.2), and Bundler cannot
continue.
Make sure that `gem install numo-gsl -v '0.1.2' --source 'https://rubygems.org/'`
succeeds before bundling.
brew install gsl

今度こそ成功しました。 success!